Abstracts grouped by Topic

General neuroinformatics (35)

Computational neuroscience (38)

Digital atlasing (17)

Neuroimaging (33)

• Uncovering intrinsic connectional architecture of functional networks in awake rat brain
  Zhifeng Liang (University of Massachusetts Med. School), Jean King (University of Massachusetts Med. School), Nanyin Zhang (University of Massachusetts Med. School)
• Prediction of Illness severity rating scores from structural brain scans in Major Depressive Disorder.
  Benson Mwangi Irungu (University of Dundee,Scotland UK), Keith Matthews (University of Dundee,Scotland UK), Douglas Steele (University of Dundee Scotland UK)
• BrainTrap Comparisons: Fly Brain Protein Trap Data Analysis
  Seymour Knowles-Barley (The University of Edinburgh), J Douglas Armstrong (The University of Edinburgh)
• Identification and Classification of Functional Modules in the Brain
  Jane Wang (Northwestern University), Luis Amaral (Northwestern University, HHMI), James Booth (Northwestern University)
• Using neuRosim to simulate magnitude fMRI data containing physiological noise
  Marijke Welvaert (Department of Data Analysis), Yves Rosseel (Department of Data Analysis)
• Fast, fully automated MRI-based measurement of the human corpus callosum
  Timothy J Herron (US Veterans Affairs, Neurology), Xiaojian Kang (UC Davis, Neurology & Neuroscience), And U Turken (US Veterans Affairs Research), David L Woods (US Veterans Affairs & UC Davis)
• Dynamical causal modeling of fMRI time series at 3T: effect of the magnetic field mismatch
  Patrick Dupont (Labo for cognitive neurology and Medical Imaging Research Center, K.U.Leuven), Céline Gillebert (Labo for cognitive neurology, K.U.Leuven), Natalie Nelissen (Labo for cognitive neurology, K.U.Leuven), Rik Vandenberghe (Labo for cognitive neurology, K.U.Leuven and Neurology Department, UZLeuven)
• Do ontological concepts stand up to a meta-analysis of neuroimaging data?
  Jessica Turner (Mind Research Network, Albuquerque, NM), Peter Fox (Research Imaging Center, UTHSCSA, San Antonio, TX), Christian Beckmann (FMRIB (Oxford University Centre for Functional MRI of the Brain), University of Oxford, Oxford, UK), Stephen Smith (FMRIB (Oxford University Centre for Functional MRI of the Brain), University of Oxford, Oxford, UK), Angela Laird (Research Imaging Center, UTHSCSA, San Antonio, TX)
• Segregation and Integration of Cortical Connections in the Developing Brain
  Budhachandra Khundrakpam (McConnell Brain Imaging Center, Montreal Neurological Institute, McGill University, Montreal, Canada), Andrew Reid (McConnell Brain Imaging Center, Montreal Neurological Institute, McGill University, Montreal, Canada), Jens Brauer (Max Planck Institute for Human Cognitive Sciences, Leipzig, Germany), Junki Lee (McConnell Brain Imaging Center, Montreal Neurological Institute, McGill University, Montreal, Canada), Felix Carbonell (McConnell Brain Imaging Center, Montreal Neurological Institute, McGill University, Montreal, Canada), Gaolang Gong (McConnell Brain Imaging Center, Montreal Neurological Institute, McGill University, Montreal, Canada), Zhang Chen (McConnell Brain Imaging Center, Montreal Neurological Institute, McGill University, Montreal, Canada), Yong He (State Key Laboratory of Cognitive Neuroscience & Learning, Beijing Normal University, Beijing, China), Alan Evans (McConnell Brain Imaging Center, Montreal Neurological Institute, McGill University, Montreal, Canada)
• EEG Source Estimation via Cortical Graph Smoothing
  David Hammond (NeuroInformatics Center, University of Oregon), Benoit Scherrer (Computational Radiology Laboratory, Children's Hospital, Boston MA)
• Integration of Semantically Annotated Neuroimaging Data via Chained Queries
  Nolan Nichols (University of Washington), Jessica Turner (Mind Research Network), Landon Detwiler (University of Washington), Jose Mejino (University of Washington), Daniel Rubin (Stanford University), James Brinkley (University of Washington)
• Intrinsic functional architecture predicts electrically evoked responses in the human brain
  Corey Keller (Albert Einstein College of Medicine), Stephan Bickel (North Shore LIJ Health System), Laszlo Entz (eInstitute for Psychology of the Hungarian Academy of Sciences), Fred Lado (Department of Neurology, Montefiore Medical Center), Istvan Ulbert (eInstitute for Psychology of the Hungarian Academy of Sciences), Clare Kelly (New York University Child Study Center), Michael Milham (New York University Child Study Center), Ashesh Mehta (North Shore LIJ Health System)
• Modeling Neural Collaboration: Measuring the Odds of Cooperation in the Gyri of Frontal Lobes
  Jeff B. Cromwell (Department of Biomedical Informatics, University of Pittsburgh School of Medicine)
• Source space effective connectivity analysis of MEG/EEG data using Kalman filter based time-varying Granger causality
  Ricky Sachdeva (Massachusetts General Hospital, Athinoula A. Martinos Center for Biomedical Imaging), Seppo Ahlfors (Massachusetts General Hospital, Athinoula A. Martinos Center for Biomedical Imaging), David Gow (Massachusetts General Hospital, Athinoula A. Martinos Center for Biomedical Imaging, Salem State University)
• NeuroSynth: a new platform for large-scale automated synthesis of human functional neuroimaging data
  Tal Yarkoni (University of Colorado - Boulder), Russell A. Poldrack (University of Texas - Austin), Thomas E. Nichols (University of Warwick), David C. Van Essen (Washington University School of Medicine), Tor D. Wager (University of Colorado - Boulder)
• Brain decoding and networks studies: well beyond standard analysis in fMRI with Python and scikits.learn
  Gael Varoquaux (Unicog INSERM, Neurospin, France), Alexandre Gramfort (Martinos Center, Harvard Medical School, MGH, Boston), Michel Vincent (Parietal INRIA, Neurospin, France), Fabian Pedregosa (Parietal INRIA, Neurospin, France), Bertrand Thirion (Parietal INRIA, Neurospin, France)
• Hemispheric asymmetries in the resting-sate functional connectivity patterns of the brain regions critical for language comprehension
  And U. Turken (Veterans Affairs Northern California Health Care System, Martinez, CA), Nina F. Dronkers (Veterans Affairs Northern California Health Care System, Martinez, CA; and UC Davis Neurology Department, Davis, CA)
• Prediction of weight and aerobic fitness with resting-state fMRI
  Jeremy Huckins (Dartmouth College), Kathryn Demos (Brown University), Todd Heatherton (Dartmouth College), William Kelley (Dartmouth College)
• Methods for Analyzing Data on Cortical Activation by Voltage-Sensitive Dye
  Mark Reimers (Biostatistics, VCU)
• Methods for Correcting Artifacts in FMRI Time Series
  Mark Reimers (Biostatistics, VCU)
• Statistical Significance of Modular Structure Detection
  Yu-Teng Chang (Signal and Image Processing Institute, University of Southern California, Los Angeles, CA), Dimitrios Pantazis (McGovern Institute for Brain Research, MIT, Boston, MA, USA), Richard Leahy (Signal and Image Processing Institute, University of Southern California, Los Angeles, CA)
• The Neuroimaging Informatics Tools and Resources Clearinghouse: Year 4 Update
  David Kennedy (Univ. of Massachusetts Medical Center), Christian Haselgrove (Univ. of Massachusetts Medical Center), Nina Preuss (TCG, Inc), Maryann Martone (University of California at San Diego), Jeff Grethe (University of California at San Diego,)
• Relating function to structure: fMRI in (transgenic) mice and the Waxholm Space Reference System
  Andreas Hess (I.f. Pharmacology, FAU Erlangen Nuremberg, Germany), Silke Kreitz (I.f. Pharmacology, FAU Erlangen Nuremberg, Germany), Marina Sergejeva (I.f. Pharmacology, FAU Erlangen Nuremberg, Germany), Alexandra Badea (Center for In Vivo Microscopy, Duke University, USA), G. Allan Johnson (Center for In Vivo Microscopy, Duke University, USA), Laura Konnerth (I.f. Pharmacology, FAU Erlangen Nuremberg, Germany)
• Predicting functional activity from structural connectivity
  David Osher (MIT), Zeynep Saygin (MIT), John D.E. Gabrieli (MIT)
• Web-based collaborative neuronal reconstruction with CATMAID
  Stephan Gerhard (Institute of Neuroinformatics, UZH / ETHZ, Zürich), Mark Longair (Institute of Neuroinformatics, UZH / ETHZ, Zürich), Stephan Saalfeld (Max Planck Institute of Molecular Cell Biology and Genetics, Dresden), Pavel Tomancak (Max Planck Institute of Molecular Cell Biology and Genetics, Dresden), Albert Cardona (Institute of Neuroinformatics, UZH / ETHZ, Zürich)
• Resting state connectivity changes in rat model of per-motor stage Parkinson’s disease
  Pallavi Rane (Center for Comparative NeuroImaging, University of Massachusetts Medical School, Worcester, MA, USA), Jean King (Center for Comparative NeuroImaging, University of Massachusetts Medical School, Worcester, MA, USA)
• CANDIShare: A Resource for Pediatric Neuroimaging Data
  Steven Hodge (Department of Psychiatry, University of Massachusetts Medical School, Worcester, MA, USA), David Kennedy (Department of Psychiatry, University of Massachusetts Medical School, Worcester, MA, USA), Christian Haselgrove (Department of Psychiatry, University of Massachusetts Medical School, Worcester, MA, USA), Jean Frazier (Department of Psychiatry, University of Massachusetts Medical School, Worcester, MA, USA)
• Keeping it Simple: Sharing 2631+ Resting State fMRI Datasets Through the FCP, INDI and ADHD-200 Sample
  Maarten Mennes (NYU Langone Medical Center, New York, NY, USA), F. Xavier Castellanos (NYU Langone Medical Center, New York, NY, USA & Nathan Kline Institute for Psychiatric Research, Orangeburg, NY, USA), Michael P. Milham (NYU Langone Medical Center, New York, NY, USA & Nathan Kline Institute for Psychiatric Research, Orangeburg, NY, USA)
• Network Analysis of Pain Processing: Pain is more than Sensation
  Silke Kreitz (I. f. Pharmacology, FAU-Erlangen/Nuremberg, Germany), Marina Sergejeva (I. f. Pharmacology, FAU-Erlangen/Nuremberg, Germany), Andreas Hess (I. f. Pharmacology, FAU-Erlangen/Nuremberg, Germany)
• A toolbox for the visualization and metaanalysis of functional organization of the cortex using an anatomical database
  Timothy J Herron (US Veterans Affairs Research), Anthony D Cate (US Veterans Affairs Research), Xiaojian Kang (UC Davis Neurology and Center for Neuroscience), David L Woods (US Veterans Affairs and UC Davis)
• Accessing and scripting Neuroimaging XNAT databases with PyXnat
  Yannick Schwartz (Neurospin-I2BM-CEA), Alexis Barbot (Neurospin-I2BM-CEA), Vincent Frouin (Neurospin-I2BM-CEA), Benjamin Thyreau (Neurospin-I2BM-CEA), Gael Varoquaux (Neurospin-INRIA), Bertrand Thirion (Neurospin-INRIA), Jean-Baptiste Poline (Neurospin-I2BM-CEA)
• A method for reducing cross-talk in MEG data with subspace suppression and the nulling beamformer
  Kunjan Rana (Boston University, Boston, MA, USA), Lucia Maria Vaina (Boston University& Harvard Medical School, Massachusetts General Hospital, USA), Matti Hämäläinen (Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA)
• Investigation of NeuroDevelopment using MRS and Functional Connectivity
  Elif Sikoglu (CCNI, UMASS Medical School), Ana Liso (CCNI, UMASS Medical School), Nanyin Zhang (CCNI, UMASS Medical School), David Kennedy (CANDI, UMASS Medical School), Jean Frazier (CANDI, UMASS Medical School), Jean King (CCNI, UMASS Medical School), Constance Moore (CCNI, UMASS Medical School)

Genomics and genetics (6)

Large scale modeling (12)

Neuromorphic engineering (0)

Brain machine interface (4)

Electrophysiology (9)

Infrastructural and portal services (9)

Clinical neuroscience (2)